List of A Pup Named Scooby-Doo episodes

Season One (1988–1989)

 * 1) "A Bicycle Built For Boo!" September 10, 1988 1
 * 2) "The Sludge Monster From The Earth's Core" September 17, 1988
 * 3) "Wanted Cheddar Alive" September 24, 1988
 * 4) "The Schnook Who Took My Comic Book" October 1, 1988
 * 5) "For Letter or Worse" October 8, 1988 2
 * 6) "The Babysitter from Beyond" October 15, 1988
 * 7) "Snow Place Like Home" October 22, 1988
 * 8) "Now Museum, Now You Don't" October 29, 1988
 * 9) "Scooby Dude" November 5, 1988 3
 * 10) "Ghost Who's Coming For Dinner?" November 12, 1988
 * 11) "The Story Stick" November 19, 1988
 * 12) "Robopup" November 26, 1988
 * 13) "Lights...Camera...Monster" December 3, 1988 4

Season Two (1989–1990)

 * 1) "Curse of the Collar" September 9, 1989 4
 * 2) "The Return of Commander Cool" September 16, 1989
 * 3) "The Spirit of Rock 'n' Roll" September 23, 1989
 * 4) "Chickenstein Lives!" September 30, 1989 5
 * 5) "Night of the Living Burger" October 7, 1989
 * 6) "The Computer Walks Among Us" October 14, 1989
 * 7) "Dog Gone Scooby" October 21, 1989
 * 8) "Terror, Thy Name is Zombo" October 28, 1989

Season Three (1990–1991)

 * 1) "Night of the Boogey Biker" September 8, 1990
 * 2) "Dawn of the Space Shuttle Scare" September 15, 1990
 * 3) "Horror of the Haunted Hairpiece" September 22, 1990
 * 4) "Wrestle Maniacs" September 29, 1990
 * 5) "The Mayhem of the Moving Mollusk" July 6, 1991
 * 6) "The Were-Doo of Doo Manor" July 13, 1991
 * 7) "Catcher of the Sly" July 20, 1991
 * 8) "The Ghost of Mrs. Shusham" July 27, 1991
 * 9) "The Wrath of Waitro" August 31, 1991

Notes: Following the final first-run episode on October 28, reruns from the first seasons were rerun alongside episodes from the second season. The shows aired at 12:30 PM during seasons two and three, and was often pre-empted for football game broadcasts.

From October 6, 1990 to July 6, 1991, a Pup Named Scooby-Doo rerun (from season one, season two, or the first half of season three) was scheduled for broadcast. The final five first-run episodes were not run until July and August of 1991.